Public Member Functions | |
PointError () | |
Default constructor. | |
PointError (Double plusminus, ErrorSource sourcetype, ErrorNorm normtype) | |
Constructor for symmetric error. | |
PointError (Double plus, Double minus, ErrorSource sourcetype, ErrorNorm normtype) | |
Constructor for asymmetric errors. | |
PointError (Point parent, Double plusminus, ErrorSource sourcetype, ErrorNorm normtype) | |
Constructor for symmetric error, with parent point. | |
PointError (Point parent, Double plus, Double minus, ErrorSource sourcetype, ErrorNorm normtype) | |
Constructor for asymmetric errors, with parent point. | |
Uncertainty | getAbsoluteError () throws HDException |
Get the absolute error corresponding to this error and its point's value. | |
Uncertainty | getAbsoluteError (Point p) throws HDException |
Get the absolute error corresponding to this error and a given point (which must be this error's parent point). | |
Integer | getId () |
Get the point error ID. | |
PointError | setId (Integer pointErrorId) |
Set the point error ID. | |
.hibernate.annotations.Parent Point | getPoint () |
Get the parent point. | |
PointError | setPoint (Point parentPoint) |
Set the parent point. | |
int | compareTo (PointError other) |
boolean | equals (Object other) |
Override equals method with business key equality. | |
int | hashCode () |
Override hashcode method. | |
boolean | isSymmetric () |
Are the plus and minus errors symmetric? | |
boolean | hasZeroSize () |
Are the plus and minus errors both zero? | |
Double | getPlus () |
Get the upward error. | |
Uncertainty | setPlus (Double plus) |
Set the upward error. | |
Double | getMinus () |
Get the downward error. | |
Uncertainty | setMinus (Double minus) |
Set the downward error. | |
ErrorSource | getSourceType () |
Get the error source type (stat, sys, etc. | |
Uncertainty | setSourceType (ErrorSource sourcetype) |
Set the error source type (stat, sys, etc. | |
ErrorNorm | getNormType () |
Get the error normalization type (abs, frac, pct, etc. | |
Uncertainty | setNormType (ErrorNorm normtype) |
Set the error normalization type (abs, frac, pct, etc. | |
String | getComment () |
Get the modification comment string. | |
Uncertainty | setComment (String comment) |
Set the modification comment string. | |
int | compareTo (Uncertainty other) |
String | toString () |
String representation. | |
String | toString (Integer indentBy) |
Indented string representation. | |
Package Functions | |
Logger | log () |
Neat method to allow every class to get hold of a custom-named Logger. |
as stored by a Value.
Definition at line 14 of file PointError.java.
PointError | ( | ) |
PointError | ( | Double | plusminus, | |
ErrorSource | sourcetype, | |||
ErrorNorm | normtype | |||
) |
Constructor for symmetric error.
plusminus | : size of symmetric error | |
sourcetype | : origin of error, i.e. systematic, statistical, etc. | |
normtype | : normalisation of error, i.e. absolute, fractional, percentage, etc. |
Definition at line 38 of file PointError.java.
PointError | ( | Double | plus, | |
Double | minus, | |||
ErrorSource | sourcetype, | |||
ErrorNorm | normtype | |||
) |
Constructor for asymmetric errors.
plus | input <0 gives -err1 | |
minus | input <0 gives +err2 | |
sourcetype | : origin of error, i.e. systematic, statistical, etc. | |
normtype | : normalisation of error, i.e. absolute, fractional, percentage, etc. |
Definition at line 49 of file PointError.java.
PointError | ( | Point | parent, | |
Double | plusminus, | |||
ErrorSource | sourcetype, | |||
ErrorNorm | normtype | |||
) |
Constructor for symmetric error, with parent point.
Definition at line 56 of file PointError.java.
References PointError.setPoint().
00056 { 00057 super(plusminus, sourcetype, normtype); 00058 setPoint(parent); 00059 }
PointError | ( | Point | parent, | |
Double | plus, | |||
Double | minus, | |||
ErrorSource | sourcetype, | |||
ErrorNorm | normtype | |||
) |
Constructor for asymmetric errors, with parent point.
Definition at line 64 of file PointError.java.
References PointError.setPoint().
00064 { 00065 super(plus, minus, sourcetype, normtype); 00066 setPoint(parent); 00067 }
Uncertainty getAbsoluteError | ( | ) | throws HDException |
Get the absolute error corresponding to this error and its point's value.
Definition at line 74 of file PointError.java.
References Uncertainty.getAbsoluteError(), and PointError.getPoint().
00074 { 00075 return super.getAbsoluteError(getPoint()); 00076 }
Uncertainty getAbsoluteError | ( | Point | p | ) | throws HDException |
Get the absolute error corresponding to this error and a given point (which must be this error's parent point).
Reimplemented from Uncertainty.
Definition at line 80 of file PointError.java.
References PointError.getPoint().
00080 { 00081 if (! p.equals(getPoint())) { 00082 throw new HDException("Tried to apply a point error to a point other than its owner."); 00083 } 00084 return super.getAbsoluteError(p); 00085 }
Integer getId | ( | ) |
Get the point error ID.
Definition at line 92 of file PointError.java.
Referenced by PointError.compareTo(), PointError.hashCode(), and PointError.setPoint().
PointError setId | ( | Integer | pointErrorId | ) |
Set the point error ID.
Definition at line 96 of file PointError.java.
Referenced by PointError.setPoint().
.hibernate.annotations.Parent Point getPoint | ( | ) |
Get the parent point.
Definition at line 107 of file PointError.java.
Referenced by PointError.getAbsoluteError(), and PointError.hashCode().
PointError setPoint | ( | Point | parentPoint | ) |
Set the parent point.
Definition at line 112 of file PointError.java.
References Point.getErrors(), PointError.getId(), Storeable.log(), and PointError.setId().
Referenced by Point.addError(), and PointError.PointError().
00112 { 00113 log().debug("Calling setPoint()"); 00114 _point = parentPoint; 00115 if (parentPoint != null) { 00116 if (getId() == null) { 00117 int highestId = 0; 00118 if (parentPoint.getErrors().size() > 0) { 00119 highestId = parentPoint.getErrors().last().getId(); 00120 } 00121 log().debug("Incrementing point error ID: " + (highestId + 1)); 00122 setId(highestId + 1); 00123 } 00124 parentPoint.getErrors().add(this); 00125 } else { 00126 log().warn("Tried to attach a PointError to a null Point"); 00127 } 00128 return this; 00129 }
int compareTo | ( | PointError | other | ) |
Definition at line 135 of file PointError.java.
References PointError.getId(), and Storeable.log().
Referenced by Uncertainty.compareTo().
00135 { 00136 log().debug("Comparing point errors..."); 00137 if (getId() == null) { 00138 log().warn("Null point error ID"); 00139 return 1; // Sort null point errors at the end 00140 } else if (getId() > other.getId()) { 00141 log().debug("Greater than"); 00142 return 1; 00143 } else if (getId() < other.getId()) { 00144 log().debug("Less than"); 00145 return -1; 00146 } else { 00147 log().debug("Equal to"); 00148 return 0; 00149 } 00150 }
boolean equals | ( | Object | other | ) |
Override equals method with business key equality.
Definition at line 157 of file PointError.java.
References PointError.hashCode().
00157 { 00158 if (this == other) return true; 00159 if (! (other instanceof PointError)) return false; 00160 return hashCode() == other.hashCode(); 00161 }
int hashCode | ( | ) |
Override hashcode method.
Definition at line 164 of file PointError.java.
References PointError.getId(), Uncertainty.getMinus(), Uncertainty.getNormType(), Uncertainty.getPlus(), PointError.getPoint(), Uncertainty.getSourceType(), and Point.hashCode().
Referenced by PointError.equals().
00164 { 00165 int code = 23; 00166 if (getPoint() != null) code ^= getPoint().hashCode(); 00167 if (getSourceType() != null) code ^= getSourceType().hashCode(); 00168 if (getNormType() != null) code ^= getNormType().hashCode(); 00169 if (getId() != null) code ^= getId().hashCode(); 00170 if (getPlus() != null) code ^= 2 * getPlus().hashCode(); // ensure this is even 00171 if (getMinus() != null) code ^= 2 * getMinus().hashCode() + 1; // ensure this is odd 00172 return code; 00173 }
boolean isSymmetric | ( | ) | [inherited] |
Are the plus and minus errors symmetric?
Definition at line 81 of file Uncertainty.java.
References Uncertainty.getMinus(), and Uncertainty.getPlus().
Referenced by Uncertainty.toString().
boolean hasZeroSize | ( | ) | [inherited] |
Are the plus and minus errors both zero?
Definition at line 87 of file Uncertainty.java.
References Uncertainty.getMinus(), and Uncertainty.getPlus().
Double getPlus | ( | ) | [inherited] |
Get the upward error.
Definition at line 125 of file Uncertainty.java.
Referenced by Uncertainty.getAbsoluteError(), PointError.hashCode(), DatasetError.hashCode(), AxisError.hashCode(), Uncertainty.hasZeroSize(), Uncertainty.isSymmetric(), and Uncertainty.toString().
Uncertainty setPlus | ( | Double | plus | ) | [inherited] |
Set the upward error.
Definition at line 130 of file Uncertainty.java.
Referenced by Uncertainty.Uncertainty().
Double getMinus | ( | ) | [inherited] |
Get the downward error.
Definition at line 138 of file Uncertainty.java.
Referenced by Uncertainty.getAbsoluteError(), PointError.hashCode(), DatasetError.hashCode(), AxisError.hashCode(), Uncertainty.hasZeroSize(), Uncertainty.isSymmetric(), and Uncertainty.toString().
Uncertainty setMinus | ( | Double | minus | ) | [inherited] |
Set the downward error.
Definition at line 143 of file Uncertainty.java.
Referenced by Uncertainty.Uncertainty().
ErrorSource getSourceType | ( | ) | [inherited] |
Get the error source type (stat, sys, etc.
) as an enum.
Definition at line 151 of file Uncertainty.java.
Referenced by Uncertainty.getAbsoluteError(), PointError.hashCode(), DatasetError.hashCode(), AxisError.hashCode(), and Uncertainty.toString().
Uncertainty setSourceType | ( | ErrorSource | sourcetype | ) | [inherited] |
Set the error source type (stat, sys, etc.
) from the enum.
Definition at line 156 of file Uncertainty.java.
Referenced by Uncertainty.Uncertainty().
ErrorNorm getNormType | ( | ) | [inherited] |
Get the error normalization type (abs, frac, pct, etc.
) as an enum.
Definition at line 163 of file Uncertainty.java.
Referenced by Uncertainty.getAbsoluteError(), PointError.hashCode(), DatasetError.hashCode(), AxisError.hashCode(), and Uncertainty.toString().
Uncertainty setNormType | ( | ErrorNorm | normtype | ) | [inherited] |
Set the error normalization type (abs, frac, pct, etc.
) from the enum.
Reimplemented in DatasetError.
Definition at line 167 of file Uncertainty.java.
Referenced by Uncertainty.Uncertainty().
String getComment | ( | ) | [inherited] |
Get the modification comment string.
Definition at line 174 of file Uncertainty.java.
Referenced by Uncertainty.toString().
Uncertainty setComment | ( | String | comment | ) | [inherited] |
int compareTo | ( | Uncertainty | other | ) | [inherited] |
Definition at line 187 of file Uncertainty.java.
References DatasetError.compareTo(), AxisError.compareTo(), PointError.compareTo(), and Storeable.log().
00187 { 00188 log().debug("Comparing errors..."); 00189 00190 // For point errors 00191 if (this instanceof PointError) { 00192 if (other instanceof PointError) { 00193 PointError test = (PointError) this; 00194 int result = test.compareTo((PointError) other); 00195 if (result != 0) return result; 00196 } else return 1; 00197 } 00198 00199 // For axis errors 00200 if (this instanceof AxisError) { 00201 if (other instanceof AxisError) { 00202 AxisError test = (AxisError) this; 00203 int result = test.compareTo((AxisError) other); 00204 if (result != 0) return result; 00205 } else return (other instanceof PointError) ? -1 : 1; 00206 } 00207 00208 // For dataset errors 00209 if (this instanceof DatasetError) { 00210 if (other instanceof DatasetError) { 00211 DatasetError test = (DatasetError) this; 00212 int result = test.compareTo((DatasetError) other); 00213 if (result != 0) return result; 00214 } else return 1; 00215 } 00216 00218 return 0; 00219 }
String toString | ( | ) | [inherited] |
String representation.
Reimplemented from Storeable.
Definition at line 227 of file Uncertainty.java.
Referenced by Uncertainty.toString().
00227 { 00228 return toString(0); 00229 }
String toString | ( | Integer | indentBy | ) | [inherited] |
Indented string representation.
Definition at line 233 of file Uncertainty.java.
References Uncertainty.getComment(), Uncertainty.getMinus(), Uncertainty.getNormType(), Uncertainty.getPlus(), Uncertainty.getSourceType(), Uncertainty.isSymmetric(), Storeable.log(), and Uncertainty.toString().
00233 { 00234 log().debug("Writing out error as a string"); 00235 StringBuffer s = new StringBuffer(); 00236 String indent = ""; 00237 for (int i = 0; i < indentBy; ++i) indent += " "; 00238 00239 //if (! hasZeroSize()) { 00240 s.append(indent); 00241 Double plusval = getPlus(); 00242 Double minusval = getMinus(); 00243 00244 String numFormat = "###.##"; 00245 // Use the number formatter to recalculate and display everything as a percentage 00246 if (getNormType() == ErrorNorm.PCT) { 00247 plusval /= 100; 00248 minusval /= 100; 00249 } 00250 if (getNormType() == ErrorNorm.FRAC || getNormType() == ErrorNorm.PCT) { 00251 numFormat += "%"; // multiplies by 100 and sticks "%" on the end 00252 } 00253 DecimalFormat numFormatter = new DecimalFormat(numFormat); 00254 if (isSymmetric()) { 00255 s.append("+- " + numFormatter.format(plusval)); 00256 } else { 00257 s.append("+ " + numFormatter.format(plusval)); 00258 s.append(" - " + numFormatter.format(minusval)); 00259 } 00260 s.append(" ("); 00261 //s.append(getNormType().toString()); 00262 //s.append(", "); 00263 s.append(getSourceType().toString()); 00264 s.append(")"); 00265 if (getComment() != null && getComment().length() != 0) { 00266 s.append(" [" + getComment() + "]"); 00267 } 00268 //} 00269 return s.toString(); 00270 }
Logger log | ( | ) | [package, inherited] |
Neat method to allow every class to get hold of a custom-named Logger.
Definition at line 14 of file Storeable.java.
Referenced by Uncertainty.compareTo(), Reference.compareTo(), PointError.compareTo(), Modification.compareTo(), Experiment.compareTo(), DatasetError.compareTo(), AxisError.compareTo(), Data.makeExample(), Data.makeExampleDataset(), Data.makeExampleExperiment(), Data.makeExamplePaper(), Data.makeExampleXAxes(), Data.makeExampleYAxes(), AxisError.setAxis(), DatasetError.setDataset(), DatasetError.setNormType(), PointError.setPoint(), and Uncertainty.toString().